BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034C09SP1|AL429878
(823 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1706 1500 0.0
>3x_Contig1706
Length = 16303
Score = 1500 bits (748), Expect = 0.0
Identities = 802/824 (97%), Gaps = 4/824 (0%)
Strand = Plus / Plus
Query: 1 gatcaaactttggaggcattttgtgtctaattcgtctatcctacttgggtatggagactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3979 gatcaaactttggaggcattttgtgtctaattcgtctatcctacttgggtatggagactt 4038
Query: 61 cgtaaaccaagaagtaatattaaagtaaagctgatataaaacaactaataataatatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4039 cgtaaaccaagaagtaatattaaagtaaagctgatataaaacaactaataataatatata 4098
Query: 121 atavtatatgcmatggataaattaactaccaatcttgaataataatcgttattgtaattg 180
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4099 ataatatatgcaatggataaattaactaccaatcttgaataataatcgttattgtaattg 4158
Query: 181 aaaagttcctttacttttacagatttaccatatgtgttgaaacgttggattatcccccca 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 4159 aaaagttcctttacttttacagatttaccat-tgtgttgaaacgttggattatcccccca 4217
Query: 241 gtgctcgtctttggaaaatttcctgtaggcwcgaactgggcacgacgtgccacctgggga 300
|||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||
Sbjct: 4218 gtgctcgtctttggaaaatttcctgtaggctcgaactgggca-gac-tgccacctgggga 4275
Query: 301 aacggctaggcaggggagttctgtctagcttccaggaaggcgggcagwaatgggaaccac 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4276 aacggctaggcaggggagttctgtctagcttccaggaaggcgggcagtaatgggaaccac 4335
Query: 361 taggsagaggccctgtctgggttttcctwcccagtggcatccaagcccactatcctagaa 420
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4336 taggcagaggccctgtctgggttttccttcccagtggcatccaagcccactatcctagaa 4395
Query: 421 agaattgggatgttaggcaaggggatgcaacatagattccaccaaagaattttcgaaatt 480
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4396 agaattgggatgttaggcaaggggatgcaacatagattccaccaaggaattttcgaaatt 4455
Query: 481 tgacaaaaaggacgcaaatttcttggtacgaagaacggaacaaaagtaagagagtatggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4456 tgacaaaaaggacgcaaatttcttggtacgaagaacggaacaaaagtaagagagtatggg 4515
Query: 541 ccagaaagttgctcgcagastgaagakcgttgcacatctaatgaggcstgsktggtagtg 600
||||||||||||||||||| ||| |||||||||||||||||||| || ||||||||
Sbjct: 4516 ccagaaagttgctcgcagagctgagatcgttgcacatctaatgaggcctgcttggtagtg 4575
Query: 601 cttttggtcttgtcctttggctgggattacgcagggaatcgaawaatatgcctatgtcac 660
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4576 cttttggtcttgtcctttggctgggattacgcagggaatcgaataatatgcctatgtcac 4635
Query: 661 gtgatatcmggatttctctcaaaacttctctttcgggaacttttttaaggggaatg-aaa 719
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 4636 gtgatatcaggatttctctcaaaacttctctttcgggaacttttttaaggggaatgaaaa 4695
Query: 720 tacacccatacatattatacaaaatatatggaggcactgatgttgcacagtctcatgttt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4696 tacacccatacatattatacaaaatatatggaggcactgatgttgcacagtctcatgttt 4755
Query: 780 tcttgtttwttttcgtctgtgaacccttcacggtcactatcaca 823
|||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4756 tcttgtttattttcgtctgtgaacccttcacggtcactatcaca 4799
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5666
Number of Sequences: 1807
Number of extensions: 5666
Number of successful extensions: 154
Number of sequences better than 1.0e-20: 1
length of query: 823
length of database: 10,358,551
effective HSP length: 16
effective length of query: 807
effective length of database: 10,329,639
effective search space: 8336018673
effective search space used: 8336018673
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)